Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm15427-201ENSMUST00000117288 531 ntBASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm27301-201ENSMUST00000184012 127 ntBASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm20553-201ENSMUST00000204205 844 ntBASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpsf4Q8BQZ5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpsf4Q8BQZ5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpsf4Q8BQZ5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms