Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdhr3Q8BL00 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Gm14042-201ENSMUST00000120139 833 ntBASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Gm21362-201ENSMUST00000194272 928 ntBASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdhr3Q8BL00 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdhr3Q8BL00 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdhr3Q8BL00 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdhr3Q8BL00 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Gm10060-201ENSMUST00000212002 111 ntBASIC12.64□□□□□ -0.39
Cdhr3Q8BL00 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms