Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Gm5867-201ENSMUST00000063197 592 ntBASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh20Q8BIZ0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Gm17271-201ENSMUST00000165535 355 ntBASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Gm10499-201ENSMUST00000174094 934 ntBASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Gm24513-201ENSMUST00000174964 138 ntBASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdh20Q8BIZ0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Gm6736-201ENSMUST00000166583 948 ntBASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Gm27397-201ENSMUST00000184997 107 ntBASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh20Q8BIZ0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh20Q8BIZ0 Gm13597-201ENSMUST00000121239 375 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms