Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc40Q8BI79 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc40Q8BI79 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc40Q8BI79 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc40Q8BI79 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Gm13597-201ENSMUST00000121239 375 ntBASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc40Q8BI79 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc40Q8BI79 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc40Q8BI79 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc40Q8BI79 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms