Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx42Q810A7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx42Q810A7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx42Q810A7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx42Q810A7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.77□□□□□ -0.05
Ddx42Q810A7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Gm9727-201ENSMUST00000161387 555 ntBASIC14.77□□□□□ -0.05
Ddx42Q810A7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.77□□□□□ -0.05
Ddx42Q810A7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx42Q810A7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gm11780-201ENSMUST00000136880 516 ntBASIC14.76□□□□□ -0.05
Ddx42Q810A7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.76□□□□□ -0.05
Ddx42Q810A7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.76□□□□□ -0.05
Ddx42Q810A7 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.76□□□□□ -0.05
Ddx42Q810A7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.76□□□□□ -0.05
Ddx42Q810A7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx42Q810A7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.75□□□□□ -0.05
Ddx42Q810A7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.75□□□□□ -0.05
Ddx42Q810A7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.75□□□□□ -0.05
Ddx42Q810A7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.75□□□□□ -0.05
Ddx42Q810A7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx42Q810A7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms