Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Srrm3Q80WV7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Gm14701-201ENSMUST00000117156 348 ntBASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 AV026068-213ENSMUST00000223675 1171 ntBASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Srrm3Q80WV7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Srrm3Q80WV7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Gm11025-201ENSMUST00000140773 466 ntBASIC15.08■□□□□ 0
Srrm3Q80WV7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Gm5745-201ENSMUST00000183748 313 ntBASIC15.08■□□□□ 0
Srrm3Q80WV7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.08■□□□□ 0
Srrm3Q80WV7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Gm18622-201ENSMUST00000219361 595 ntBASIC15.08■□□□□ 0
Srrm3Q80WV7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.08■□□□□ 0
Srrm3Q80WV7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Srrm3Q80WV7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Srrm3Q80WV7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Srrm3Q80WV7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Srrm3Q80WV7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.07■□□□□ 0
Srrm3Q80WV7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms