Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Gm6180-201ENSMUST00000065243 498 ntBASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm11543-201ENSMUST00000120758 370 ntBASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm38225-201ENSMUST00000194001 393 ntBASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm18018-201ENSMUST00000198273 408 ntBASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf38bQ80SY5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Gm6266-201ENSMUST00000203844 806 ntBASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Gm10154-201ENSMUST00000084445 354 ntBASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.16■□□□□ 0.02
Prpf38bQ80SY5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms