Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Gm14042-201ENSMUST00000120139 833 ntBASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Gm27838-201ENSMUST00000184829 128 ntBASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubfd1Q78JW9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Gm3436-201ENSMUST00000179930 840 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Mir125a-201ENSMUST00000083545 68 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubfd1Q78JW9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ubfd1Q78JW9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.08□□□□□ -0.15
Ubfd1Q78JW9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ubfd1Q78JW9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ubfd1Q78JW9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ubfd1Q78JW9 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubfd1Q78JW9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms