Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.04■□□□□ -0
Cspg5Q71M36 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.04■□□□□ -0
Cspg5Q71M36 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Cspg5Q71M36 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Cspg5Q71M36 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.03■□□□□ -0
Cspg5Q71M36 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cspg5Q71M36 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cspg5Q71M36 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Gm13015-201ENSMUST00000118674 204 ntBASIC15.03■□□□□ -0
Cspg5Q71M36 Gm15693-201ENSMUST00000120470 637 ntBASIC15.03■□□□□ -0
Cspg5Q71M36 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
Cspg5Q71M36 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.03■□□□□ -0
Cspg5Q71M36 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cspg5Q71M36 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cspg5Q71M36 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.03■□□□□ -0
Cspg5Q71M36 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cspg5Q71M36 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg5Q71M36 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.02■□□□□ -0
Cspg5Q71M36 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cspg5Q71M36 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cspg5Q71M36 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.02■□□□□ -0
Cspg5Q71M36 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Cspg5Q71M36 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cspg5Q71M36 Gm27920-201ENSMUST00000183953 96 ntBASIC15.02■□□□□ -0
Cspg5Q71M36 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cspg5Q71M36 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.02■□□□□ -0
Cspg5Q71M36 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg5Q71M36 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Cspg5Q71M36 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Gm16026-204ENSMUST00000162652 683 ntBASIC15.01□□□□□ -0.01
Cspg5Q71M36 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Gm27306-201ENSMUST00000183970 107 ntBASIC15.01□□□□□ -0.01
Cspg5Q71M36 Gm18049-201ENSMUST00000208909 581 ntBASIC15.01□□□□□ -0.01
Cspg5Q71M36 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg5Q71M36 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms