Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rif1Q6PR54 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.18□□□□□ -0.46
Rif1Q6PR54 AC122335.2-201ENSMUST00000213901 6181 ntBASIC12.18□□□□□ -0.46
Rif1Q6PR54 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm11793-201ENSMUST00000120433 981 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm1335-201ENSMUST00000121653 386 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm13297-201ENSMUST00000120205 934 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Gm33320-201ENSMUST00000192232 530 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.17□□□□□ -0.46
Rif1Q6PR54 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rif1Q6PR54 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gm5479-201ENSMUST00000160578 435 ntBASIC12.16□□□□□ -0.46
Rif1Q6PR54 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.16□□□□□ -0.46
Rif1Q6PR54 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.16□□□□□ -0.46
Rif1Q6PR54 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gm14017-201ENSMUST00000121934 386 ntBASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rif1Q6PR54 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.16□□□□□ -0.46
Rif1Q6PR54 Gm6621-201ENSMUST00000193251 772 ntBASIC12.16□□□□□ -0.46
Rif1Q6PR54 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms