Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Gm17795-201ENSMUST00000214505 757 ntBASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snrnp40Q6PE01 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Gm12957-201ENSMUST00000117835 377 ntBASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Gm12390-201ENSMUST00000117897 397 ntBASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Gm6244-201ENSMUST00000178732 841 ntBASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Gm27839-201ENSMUST00000184242 106 ntBASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snrnp40Q6PE01 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Mir1894-201ENSMUST00000122802 81 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm4804-201ENSMUST00000182234 999 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Gm17794-201ENSMUST00000220252 955 ntBASIC12.66□□□□□ -0.38
Snrnp40Q6PE01 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms