Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm14660-201ENSMUST00000119809 575 ntBASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Gm27772-201ENSMUST00000184900 187 ntBASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Chd4Q6PDQ2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Gm29741-201ENSMUST00000192667 421 ntBASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd4Q6PDQ2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Gm8062-201ENSMUST00000139696 444 ntBASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Gm27839-201ENSMUST00000184242 106 ntBASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Gm44799-201ENSMUST00000207639 1202 ntBASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.59■□□□□ 0.57
Chd4Q6PDQ2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd4Q6PDQ2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd4Q6PDQ2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd4Q6PDQ2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd4Q6PDQ2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd4Q6PDQ2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chd4Q6PDQ2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Gm24644-201ENSMUST00000157114 139 ntBASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Gm10012-201ENSMUST00000078252 192 ntBASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chd4Q6PDQ2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gm17420-201ENSMUST00000164753 153 ntBASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gm8927-201ENSMUST00000181978 981 ntBASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Gm3222-201ENSMUST00000071282 990 ntBASIC18.57■□□□□ 0.56
Chd4Q6PDQ2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Chd4Q6PDQ2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms