Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Gm6973-201ENSMUST00000117080 721 ntBASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcc2Q6PDG5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcc2Q6PDG5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcc2Q6PDG5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Gm15483-201ENSMUST00000120338 456 ntBASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Mir6990-201ENSMUST00000183724 91 ntBASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcc2Q6PDG5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Gm14042-201ENSMUST00000120139 833 ntBASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Gm5479-201ENSMUST00000160578 435 ntBASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Gm8396-201ENSMUST00000057361 823 ntBASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcc2Q6PDG5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smarcc2Q6PDG5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc2Q6PDG5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc2Q6PDG5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcc2Q6PDG5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms