Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcd3Q6P9Z1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 AV026068-213ENSMUST00000223675 1171 ntBASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcd3Q6P9Z1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcd3Q6P9Z1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcd3Q6P9Z1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms