Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Casc4Q6P2L7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.69□□□□□ -0.06
Casc4Q6P2L7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Casc4Q6P2L7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm18057-201ENSMUST00000208220 503 ntBASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.68□□□□□ -0.06
Casc4Q6P2L7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gm9726-201ENSMUST00000180321 678 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gm27920-201ENSMUST00000183953 96 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gm44335-201ENSMUST00000196879 141 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gm44297-201ENSMUST00000198304 141 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gm44346-201ENSMUST00000198851 141 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Chchd1-203ENSMUST00000224633 557 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Casc4Q6P2L7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Casc4Q6P2L7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms