Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scaf8Q6DID3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scaf8Q6DID3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Scaf8Q6DID3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scaf8Q6DID3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Scaf8Q6DID3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scaf8Q6DID3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Gm21470-201ENSMUST00000187680 696 ntBASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.82■□□□□ 0.28
Scaf8Q6DID3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Gm27847-201ENSMUST00000183711 107 ntBASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Gm27375-201ENSMUST00000183799 107 ntBASIC16.81■□□□□ 0.28
Scaf8Q6DID3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Gm8463-201ENSMUST00000208573 613 ntBASIC16.81■□□□□ 0.28
Scaf8Q6DID3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scaf8Q6DID3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf8Q6DID3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf8Q6DID3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf8Q6DID3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scaf8Q6DID3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms