Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Gm12849-201ENSMUST00000120013 739 ntBASIC15.23■□□□□ 0.03
Scube3Q66PY1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Gm18766-201ENSMUST00000189811 808 ntBASIC15.23■□□□□ 0.03
Scube3Q66PY1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.23■□□□□ 0.03
Scube3Q66PY1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.23■□□□□ 0.03
Scube3Q66PY1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.22■□□□□ 0.03
Scube3Q66PY1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Gm6415-201ENSMUST00000118488 348 ntBASIC15.22■□□□□ 0.03
Scube3Q66PY1 Gm14363-201ENSMUST00000122304 409 ntBASIC15.22■□□□□ 0.03
Scube3Q66PY1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Gm44872-201ENSMUST00000207864 420 ntBASIC15.22■□□□□ 0.03
Scube3Q66PY1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.22■□□□□ 0.03
Scube3Q66PY1 AC102523.2-201ENSMUST00000227813 983 ntBASIC15.22■□□□□ 0.03
Scube3Q66PY1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scube3Q66PY1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.21■□□□□ 0.03
Scube3Q66PY1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Gm13823-201ENSMUST00000119930 345 ntBASIC15.21■□□□□ 0.03
Scube3Q66PY1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.21■□□□□ 0.03
Scube3Q66PY1 Gm22175-201ENSMUST00000175007 78 ntBASIC15.21■□□□□ 0.03
Scube3Q66PY1 Gm27430-201ENSMUST00000184585 107 ntBASIC15.21■□□□□ 0.03
Scube3Q66PY1 Gm44333-201ENSMUST00000197168 107 ntBASIC15.21■□□□□ 0.03
Scube3Q66PY1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.21■□□□□ 0.03
Scube3Q66PY1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scube3Q66PY1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.21■□□□□ 0.02
Scube3Q66PY1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
Scube3Q66PY1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.21■□□□□ 0.02
Scube3Q66PY1 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.2■□□□□ 0.02
Scube3Q66PY1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scube3Q66PY1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scube3Q66PY1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.2■□□□□ 0.02
Scube3Q66PY1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scube3Q66PY1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scube3Q66PY1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scube3Q66PY1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scube3Q66PY1 Gm15693-201ENSMUST00000120470 637 ntBASIC15.2■□□□□ 0.02
Scube3Q66PY1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms