Protein–RNA interactions for Protein: Q62189

Snrpa, U1 small nuclear ribonucleoprotein A, mousemouse

Known RBP Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpaQ62189 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.57□□□□□ -0.08
SnrpaQ62189 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.57□□□□□ -0.08
SnrpaQ62189 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.57□□□□□ -0.08
SnrpaQ62189 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.57□□□□□ -0.08
SnrpaQ62189 Olfr286-202ENSMUST00000205305 969 ntBASIC14.57□□□□□ -0.08
SnrpaQ62189 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.57□□□□□ -0.08
SnrpaQ62189 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SnrpaQ62189 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SnrpaQ62189 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SnrpaQ62189 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.56□□□□□ -0.08
SnrpaQ62189 Gm2451-201ENSMUST00000199447 999 ntBASIC14.56□□□□□ -0.08
SnrpaQ62189 Gm10290-201ENSMUST00000200451 999 ntBASIC14.56□□□□□ -0.08
SnrpaQ62189 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.56□□□□□ -0.08
SnrpaQ62189 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SnrpaQ62189 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SnrpaQ62189 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.55□□□□□ -0.08
SnrpaQ62189 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.55□□□□□ -0.08
SnrpaQ62189 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.55□□□□□ -0.08
SnrpaQ62189 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.55□□□□□ -0.08
SnrpaQ62189 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SnrpaQ62189 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SnrpaQ62189 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.55□□□□□ -0.08
SnrpaQ62189 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms