Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim27Q62158 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim27Q62158 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trim27Q62158 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim27Q62158 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Trim27Q62158 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.78■□□□□ 0.44
Trim27Q62158 Gm27397-201ENSMUST00000184997 107 ntBASIC17.78■□□□□ 0.44
Trim27Q62158 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.78■□□□□ 0.44
Trim27Q62158 Gm43125-201ENSMUST00000201724 730 ntBASIC17.78■□□□□ 0.44
Trim27Q62158 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Chchd1-203ENSMUST00000224633 557 ntBASIC17.78■□□□□ 0.44
Trim27Q62158 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim27Q62158 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim27Q62158 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim27Q62158 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim27Q62158 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Trim27Q62158 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim27Q62158 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm29310-201ENSMUST00000185468 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21825-201ENSMUST00000185728 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm29109-201ENSMUST00000185895 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21896-201ENSMUST00000186520 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21873-201ENSMUST00000186728 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21794-201ENSMUST00000187056 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21880-201ENSMUST00000187275 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21826-201ENSMUST00000187451 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21198-201ENSMUST00000188393 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21749-201ENSMUST00000189343 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21901-201ENSMUST00000189568 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm29424-201ENSMUST00000189716 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm28599-201ENSMUST00000189838 694 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21867-201ENSMUST00000189917 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm29269-201ENSMUST00000190087 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21722-201ENSMUST00000190153 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm28423-201ENSMUST00000190701 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21899-201ENSMUST00000190745 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21910-201ENSMUST00000191163 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21849-201ENSMUST00000191571 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm28678-201ENSMUST00000191593 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm20910-201ENSMUST00000193268 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Gm21871-201ENSMUST00000194621 696 ntBASIC17.77■□□□□ 0.44
Trim27Q62158 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim27Q62158 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim27Q62158 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim27Q62158 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.77■□□□□ 0.43
Trim27Q62158 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trim27Q62158 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim27Q62158 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim27Q62158 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim27Q62158 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim27Q62158 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.76■□□□□ 0.43
Trim27Q62158 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim27Q62158 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim27Q62158 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim27Q62158 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim27Q62158 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim27Q62158 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 Gm43474-201ENSMUST00000196415 774 ntBASIC17.76■□□□□ 0.43
Trim27Q62158 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim27Q62158 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms