Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.35□□□□□ -0.27
VcanQ62059 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.35□□□□□ -0.27
VcanQ62059 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Gm22331-201ENSMUST00000158066 136 ntBASIC13.35□□□□□ -0.27
VcanQ62059 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.35□□□□□ -0.27
VcanQ62059 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.35□□□□□ -0.27
VcanQ62059 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcanQ62059 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.34□□□□□ -0.27
VcanQ62059 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Gm42627-201ENSMUST00000197347 224 ntBASIC13.34□□□□□ -0.27
VcanQ62059 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VcanQ62059 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.34□□□□□ -0.27
VcanQ62059 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.34□□□□□ -0.27
VcanQ62059 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.34□□□□□ -0.27
VcanQ62059 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VcanQ62059 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
VcanQ62059 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.34□□□□□ -0.27
VcanQ62059 Gm6916-202ENSMUST00000205523 195 ntBASIC13.34□□□□□ -0.27
VcanQ62059 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.34□□□□□ -0.27
VcanQ62059 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.34□□□□□ -0.27
VcanQ62059 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.34□□□□□ -0.27
VcanQ62059 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.34□□□□□ -0.27
VcanQ62059 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcanQ62059 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VcanQ62059 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
VcanQ62059 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.27
VcanQ62059 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VcanQ62059 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VcanQ62059 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
VcanQ62059 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Gm13689-201ENSMUST00000119360 685 ntBASIC13.33□□□□□ -0.28
VcanQ62059 Gm37008-201ENSMUST00000195712 319 ntBASIC13.33□□□□□ -0.28
VcanQ62059 Gm6983-201ENSMUST00000214912 628 ntBASIC13.33□□□□□ -0.28
VcanQ62059 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.33□□□□□ -0.28
VcanQ62059 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
VcanQ62059 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcanQ62059 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.33□□□□□ -0.28
VcanQ62059 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm13612-201ENSMUST00000119276 390 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm15393-201ENSMUST00000120499 219 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm6621-201ENSMUST00000193251 772 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VcanQ62059 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VcanQ62059 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
VcanQ62059 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Gm11524-201ENSMUST00000119349 807 ntBASIC13.32□□□□□ -0.28
VcanQ62059 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
VcanQ62059 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VcanQ62059 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcanQ62059 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms