Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Vsx2Q61412 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gm16026-204ENSMUST00000162652 683 ntBASIC14.14□□□□□ -0.15
Vsx2Q61412 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gm45612-201ENSMUST00000211320 160 ntBASIC14.14□□□□□ -0.15
Vsx2Q61412 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.14□□□□□ -0.15
Vsx2Q61412 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Vsx2Q61412 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.14□□□□□ -0.15
Vsx2Q61412 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vsx2Q61412 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Gm11745-201ENSMUST00000121669 448 ntBASIC14.13□□□□□ -0.15
Vsx2Q61412 Gm26308-201ENSMUST00000157768 69 ntBASIC14.13□□□□□ -0.15
Vsx2Q61412 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Chchd1-203ENSMUST00000224633 557 ntBASIC14.13□□□□□ -0.15
Vsx2Q61412 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.13□□□□□ -0.15
Vsx2Q61412 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vsx2Q61412 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.13□□□□□ -0.15
Vsx2Q61412 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vsx2Q61412 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vsx2Q61412 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Vsx2Q61412 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms