Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Mre11Q61216 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Mre11Q61216 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Mre11Q61216 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Mre11Q61216 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.37■□□□□ 0.37
Mre11Q61216 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Mre11Q61216 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Mre11Q61216 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Mre11Q61216 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mre11Q61216 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Gm22697-201ENSMUST00000175194 63 ntBASIC17.36■□□□□ 0.37
Mre11Q61216 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mre11Q61216 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Mre11Q61216 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Mre11Q61216 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mre11Q61216 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Mre11Q61216 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mre11Q61216 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mre11Q61216 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.35■□□□□ 0.37
Mre11Q61216 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Mre11Q61216 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.35■□□□□ 0.37
Mre11Q61216 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.35■□□□□ 0.37
Mre11Q61216 Gm6623-201ENSMUST00000173570 544 ntBASIC17.35■□□□□ 0.37
Mre11Q61216 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.35■□□□□ 0.37
Mre11Q61216 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Mre11Q61216 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mre11Q61216 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Mre11Q61216 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Mre11Q61216 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Gm11434-201ENSMUST00000122379 629 ntBASIC17.34■□□□□ 0.37
Mre11Q61216 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.34■□□□□ 0.37
Mre11Q61216 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mre11Q61216 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.34■□□□□ 0.37
Mre11Q61216 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Gm18032-201ENSMUST00000222541 538 ntBASIC17.34■□□□□ 0.37
Mre11Q61216 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mre11Q61216 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.34■□□□□ 0.37
Mre11Q61216 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mre11Q61216 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mre11Q61216 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mre11Q61216 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mre11Q61216 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mre11Q61216 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Mre11Q61216 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mre11Q61216 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.33■□□□□ 0.36
Mre11Q61216 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.33■□□□□ 0.36
Mre11Q61216 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.33■□□□□ 0.36
Mre11Q61216 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mre11Q61216 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mre11Q61216 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms