Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.04□□□□□ -0.16
Col12a1Q60847 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.04□□□□□ -0.16
Col12a1Q60847 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col12a1Q60847 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.03□□□□□ -0.16
Col12a1Q60847 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col12a1Q60847 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.03□□□□□ -0.16
Col12a1Q60847 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col12a1Q60847 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
Col12a1Q60847 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.02□□□□□ -0.16
Col12a1Q60847 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col12a1Q60847 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col12a1Q60847 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col12a1Q60847 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col12a1Q60847 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.02□□□□□ -0.16
Col12a1Q60847 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col12a1Q60847 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Col12a1Q60847 Gm6152-201ENSMUST00000151704 340 ntBASIC14.02□□□□□ -0.17
Col12a1Q60847 Gm44397-201ENSMUST00000195950 113 ntBASIC14.02□□□□□ -0.17
Col12a1Q60847 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Gm18473-201ENSMUST00000220543 868 ntBASIC14.02□□□□□ -0.17
Col12a1Q60847 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.02□□□□□ -0.17
Col12a1Q60847 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col12a1Q60847 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.02□□□□□ -0.17
Col12a1Q60847 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col12a1Q60847 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.01□□□□□ -0.17
Col12a1Q60847 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Rps4l-202ENSMUST00000204242 789 ntBASIC14.01□□□□□ -0.17
Col12a1Q60847 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.01□□□□□ -0.17
Col12a1Q60847 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.01□□□□□ -0.17
Col12a1Q60847 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.01□□□□□ -0.17
Col12a1Q60847 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.01□□□□□ -0.17
Col12a1Q60847 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Col12a1Q60847 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.01□□□□□ -0.17
Col12a1Q60847 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.01□□□□□ -0.17
Col12a1Q60847 Gm4271-201ENSMUST00000174444 973 ntBASIC14.01□□□□□ -0.17
Col12a1Q60847 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col12a1Q60847 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col12a1Q60847 Gm7029-201ENSMUST00000173226 450 ntBASIC14□□□□□ -0.17
Col12a1Q60847 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col12a1Q60847 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14□□□□□ -0.17
Col12a1Q60847 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms