Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NfkbibQ60778 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NfkbibQ60778 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NfkbibQ60778 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.35■□□□□ 0.37
NfkbibQ60778 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.35■□□□□ 0.37
NfkbibQ60778 Gm14719-201ENSMUST00000121891 340 ntBASIC17.35■□□□□ 0.37
NfkbibQ60778 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.35■□□□□ 0.37
NfkbibQ60778 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NfkbibQ60778 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.35■□□□□ 0.37
NfkbibQ60778 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NfkbibQ60778 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.34■□□□□ 0.37
NfkbibQ60778 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.34■□□□□ 0.37
NfkbibQ60778 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NfkbibQ60778 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NfkbibQ60778 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
NfkbibQ60778 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NfkbibQ60778 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NfkbibQ60778 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NfkbibQ60778 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NfkbibQ60778 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NfkbibQ60778 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NfkbibQ60778 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.33■□□□□ 0.37
NfkbibQ60778 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NfkbibQ60778 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NfkbibQ60778 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NfkbibQ60778 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NfkbibQ60778 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NfkbibQ60778 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.33■□□□□ 0.36
NfkbibQ60778 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.33■□□□□ 0.36
NfkbibQ60778 Gm4875-201ENSMUST00000118257 786 ntBASIC17.33■□□□□ 0.36
NfkbibQ60778 Gm27838-201ENSMUST00000184829 128 ntBASIC17.33■□□□□ 0.36
NfkbibQ60778 Gm44608-201ENSMUST00000206827 855 ntBASIC17.33■□□□□ 0.36
NfkbibQ60778 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.33■□□□□ 0.36
NfkbibQ60778 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.33■□□□□ 0.36
NfkbibQ60778 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.33■□□□□ 0.36
NfkbibQ60778 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.33■□□□□ 0.36
NfkbibQ60778 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NfkbibQ60778 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.32■□□□□ 0.36
NfkbibQ60778 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NfkbibQ60778 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NfkbibQ60778 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms