Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nr1h4Q60641 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.82□□□□□ -0.2
Nr1h4Q60641 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nr1h4Q60641 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.81□□□□□ -0.2
Nr1h4Q60641 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.81□□□□□ -0.2
Nr1h4Q60641 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.81□□□□□ -0.2
Nr1h4Q60641 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nr1h4Q60641 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.8□□□□□ -0.2
Nr1h4Q60641 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Gm18246-201ENSMUST00000221023 728 ntBASIC13.8□□□□□ -0.2
Nr1h4Q60641 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nr1h4Q60641 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.79□□□□□ -0.2
Nr1h4Q60641 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nr1h4Q60641 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms