Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.41■□□□□ 0.06
Shroom1Q5SX79 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Shroom1Q5SX79 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Gm24543-201ENSMUST00000103867 82 ntBASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Gm14719-201ENSMUST00000121891 340 ntBASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom1Q5SX79 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom1Q5SX79 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Gm27838-201ENSMUST00000184829 128 ntBASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Gm45098-201ENSMUST00000207179 657 ntBASIC15.38■□□□□ 0.05
Shroom1Q5SX79 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.38■□□□□ 0.05
Shroom1Q5SX79 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms