Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm23634-201ENSMUST00000175071 91 ntBASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm9726-201ENSMUST00000180321 678 ntBASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 AA414768-201ENSMUST00000121924 1257 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mir6982-201ENSMUST00000184354 68 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav15-1-dv6-1Q5R1D2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms