Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mdc1Q5PSV9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Efs-202ENSMUST00000227037 2540 ntBASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.67■□□□□ 0.58
Mdc1Q5PSV9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm13689-201ENSMUST00000119360 685 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm14660-201ENSMUST00000119809 575 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm18827-201ENSMUST00000188341 790 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm42693-201ENSMUST00000196779 631 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.66■□□□□ 0.58
Mdc1Q5PSV9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mdc1Q5PSV9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Mdc1Q5PSV9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mdc1Q5PSV9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Gm6244-201ENSMUST00000178732 841 ntBASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Gm37424-201ENSMUST00000191727 561 ntBASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mdc1Q5PSV9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms