Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Gm25352-201ENSMUST00000179815 110 ntBASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tmem40Q4FJU9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm14127-201ENSMUST00000117906 678 ntBASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm13015-201ENSMUST00000118674 204 ntBASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Syt7-205ENSMUST00000224135 1557 ntBASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tmem40Q4FJU9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Gm16215-201ENSMUST00000161990 637 ntBASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Gm29541-201ENSMUST00000191351 678 ntBASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tmem40Q4FJU9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms