Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gm15039-201ENSMUST00000118914 875 ntBASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gm44430-201ENSMUST00000203376 995 ntBASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1brtQ3UNC9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Gm14722-201ENSMUST00000118943 689 ntBASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Gm27463-201ENSMUST00000183569 57 ntBASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cks1brtQ3UNC9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cks1brtQ3UNC9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms