Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Spg11Q3UHA3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Mir6927-201ENSMUST00000184494 71 ntBASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Gm3508-201ENSMUST00000186012 792 ntBASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Spg11Q3UHA3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12217-201ENSMUST00000118858 696 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12616-201ENSMUST00000118594 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm8810-201ENSMUST00000172895 754 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm7029-201ENSMUST00000173226 450 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12624-201ENSMUST00000177615 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12621-201ENSMUST00000177760 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12615-201ENSMUST00000177970 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12622-201ENSMUST00000177975 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12627-201ENSMUST00000178412 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12625-201ENSMUST00000179122 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12614-201ENSMUST00000179586 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm12613-201ENSMUST00000180323 382 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.19□□□□□ -0.3
Spg11Q3UHA3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gm37489-201ENSMUST00000191883 159 ntBASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Spg11Q3UHA3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms