Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp25Q3U435 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp25Q3U435 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp25Q3U435 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp25Q3U435 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp25Q3U435 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.64□□□□□ -0.23
Mmp25Q3U435 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp25Q3U435 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.63□□□□□ -0.23
Mmp25Q3U435 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Gm15920-201ENSMUST00000118998 402 ntBASIC13.63□□□□□ -0.23
Mmp25Q3U435 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp25Q3U435 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Gm8410-201ENSMUST00000117225 605 ntBASIC13.62□□□□□ -0.23
Mmp25Q3U435 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.62□□□□□ -0.23
Mmp25Q3U435 Gm6222-201ENSMUST00000120787 396 ntBASIC13.62□□□□□ -0.23
Mmp25Q3U435 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Gm44872-201ENSMUST00000207864 420 ntBASIC13.62□□□□□ -0.23
Mmp25Q3U435 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.62□□□□□ -0.23
Mmp25Q3U435 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mmp25Q3U435 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Gm5566-201ENSMUST00000116118 459 ntBASIC13.61□□□□□ -0.23
Mmp25Q3U435 Gm9719-201ENSMUST00000162765 543 ntBASIC13.61□□□□□ -0.23
Mmp25Q3U435 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.61□□□□□ -0.23
Mmp25Q3U435 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp25Q3U435 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms