Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 BC037039-201ENSMUST00000192003 2205 ntBASIC12.58□□□□□ -0.4
Q3U1D9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Q3U1D9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Q3U1D9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Q3U1D9 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Q3U1D9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.57□□□□□ -0.4
Q3U1D9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Q3U1D9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.57□□□□□ -0.4
Q3U1D9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Gm27838-201ENSMUST00000184829 128 ntBASIC12.57□□□□□ -0.4
Q3U1D9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 AA619741-201ENSMUST00000195095 646 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Gm46209-201ENSMUST00000217912 553 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Gm7775-201ENSMUST00000218871 853 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.57□□□□□ -0.4
Q3U1D9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Q3U1D9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.57□□□□□ -0.4
Q3U1D9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Q3U1D9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Q3U1D9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Q3U1D9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Q3U1D9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.56□□□□□ -0.4
Q3U1D9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Q3U1D9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Q3U1D9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Q3U1D9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Q3U1D9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Q3U1D9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Q3U1D9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms