Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Q3KNL4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Q3KNL4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Q3KNL4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Q3KNL4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Gm9726-201ENSMUST00000180321 678 ntBASIC14.26□□□□□ -0.13
Q3KNL4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Q3KNL4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Q3KNL4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Q3KNL4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Q3KNL4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Q3KNL4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Q3KNL4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.25□□□□□ -0.13
Q3KNL4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Q3KNL4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.25□□□□□ -0.13
Q3KNL4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.25□□□□□ -0.13
Q3KNL4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.25□□□□□ -0.13
Q3KNL4 Gm18195-201ENSMUST00000207604 706 ntBASIC14.25□□□□□ -0.13
Q3KNL4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Q3KNL4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.25□□□□□ -0.13
Q3KNL4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.25□□□□□ -0.13
Q3KNL4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.25□□□□□ -0.13
Q3KNL4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Q3KNL4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Q3KNL4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Q3KNL4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.24□□□□□ -0.13
Q3KNL4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Q3KNL4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Mir5131-201ENSMUST00000175426 93 ntBASIC14.24□□□□□ -0.13
Q3KNL4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.24□□□□□ -0.13
Q3KNL4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Q3KNL4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.24□□□□□ -0.13
Q3KNL4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Q3KNL4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Q3KNL4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Q3KNL4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Q3KNL4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.23□□□□□ -0.13
Q3KNL4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Q3KNL4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Q3KNL4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.23□□□□□ -0.13
Q3KNL4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.23□□□□□ -0.13
Q3KNL4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.23□□□□□ -0.13
Q3KNL4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Q3KNL4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Q3KNL4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms