Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Gm6550-201ENSMUST00000187574 993 ntBASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Gm10060-201ENSMUST00000212002 111 ntBASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptchd3Q0EEE2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Gm43570-201ENSMUST00000199951 3688 ntBASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Gm11453-201ENSMUST00000117318 1007 ntBASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Gm37153-201ENSMUST00000193637 231 ntBASIC14□□□□□ -0.17
Ptchd3Q0EEE2 AC164629.2-201ENSMUST00000217916 270 ntBASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14□□□□□ -0.17
Ptchd3Q0EEE2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ptchd3Q0EEE2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ptchd3Q0EEE2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms