Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Thbs3Q05895 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Thbs3Q05895 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Thbs3Q05895 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.72□□□□□ -0.37
Thbs3Q05895 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.72□□□□□ -0.37
Thbs3Q05895 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs3Q05895 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Thbs3Q05895 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.71□□□□□ -0.37
Thbs3Q05895 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Thbs3Q05895 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Thbs3Q05895 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Thbs3Q05895 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Mir6990-201ENSMUST00000183724 91 ntBASIC12.71□□□□□ -0.37
Thbs3Q05895 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.71□□□□□ -0.37
Thbs3Q05895 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.71□□□□□ -0.37
Thbs3Q05895 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs3Q05895 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.71□□□□□ -0.38
Thbs3Q05895 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.71□□□□□ -0.38
Thbs3Q05895 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs3Q05895 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs3Q05895 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Thbs3Q05895 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs3Q05895 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs3Q05895 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs3Q05895 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs3Q05895 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Thbs3Q05895 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs3Q05895 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thbs3Q05895 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Thbs3Q05895 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.7□□□□□ -0.38
Thbs3Q05895 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Gm25287-201ENSMUST00000103846 110 ntBASIC12.7□□□□□ -0.38
Thbs3Q05895 Gm22918-201ENSMUST00000103855 110 ntBASIC12.7□□□□□ -0.38
Thbs3Q05895 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.7□□□□□ -0.38
Thbs3Q05895 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Gm27702-201ENSMUST00000184512 56 ntBASIC12.7□□□□□ -0.38
Thbs3Q05895 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.7□□□□□ -0.38
Thbs3Q05895 Gm43125-201ENSMUST00000201724 730 ntBASIC12.7□□□□□ -0.38
Thbs3Q05895 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thbs3Q05895 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.7□□□□□ -0.38
Thbs3Q05895 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Thbs3Q05895 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.7□□□□□ -0.38
Thbs3Q05895 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Thbs3Q05895 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs3Q05895 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Thbs3Q05895 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs3Q05895 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms