Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.89□□□□□ -0.03
Sox9Q04887 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.89□□□□□ -0.03
Sox9Q04887 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Sox9Q04887 Gm8652-201ENSMUST00000181363 964 ntBASIC14.89□□□□□ -0.03
Sox9Q04887 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.89□□□□□ -0.03
Sox9Q04887 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox9Q04887 Gm2451-201ENSMUST00000199447 999 ntBASIC14.89□□□□□ -0.03
Sox9Q04887 Gm10290-201ENSMUST00000200451 999 ntBASIC14.89□□□□□ -0.03
Sox9Q04887 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Sox9Q04887 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox9Q04887 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox9Q04887 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Sox9Q04887 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox9Q04887 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox9Q04887 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox9Q04887 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox9Q04887 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox9Q04887 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Sox9Q04887 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox9Q04887 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Sox9Q04887 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Sox9Q04887 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Gm26461-201ENSMUST00000175064 290 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Gm2495-201ENSMUST00000191160 466 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Gm37466-201ENSMUST00000195692 652 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Gm6013-201ENSMUST00000212264 699 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox9Q04887 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.88□□□□□ -0.03
Sox9Q04887 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox9Q04887 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox9Q04887 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sox9Q04887 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Sox9Q04887 BC001981-202ENSMUST00000191393 1545 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.87□□□□□ -0.03
Sox9Q04887 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox9Q04887 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox9Q04887 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Gm29649-201ENSMUST00000185649 419 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm5370-201ENSMUST00000187187 574 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm29127-201ENSMUST00000188304 517 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm18056-201ENSMUST00000207670 568 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm18061-201ENSMUST00000208350 562 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm18063-201ENSMUST00000208529 568 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm8463-201ENSMUST00000208573 613 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm18052-201ENSMUST00000208750 559 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Gm17795-201ENSMUST00000214505 757 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Gm9182-201ENSMUST00000217829 639 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox9Q04887 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.87□□□□□ -0.03
Sox9Q04887 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sox9Q04887 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox9Q04887 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox9Q04887 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Sox9Q04887 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox9Q04887 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sox9Q04887 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sox9Q04887 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox9Q04887 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sox9Q04887 Gm5187-201ENSMUST00000117317 991 ntBASIC14.86□□□□□ -0.03
Sox9Q04887 Gm14723-201ENSMUST00000118686 215 ntBASIC14.86□□□□□ -0.03
Sox9Q04887 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox9Q04887 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms