Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Npas1P97459 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.18□□□□□ -0.46
Npas1P97459 Rprl3-201ENSMUST00000157400 290 ntBASIC12.18□□□□□ -0.46
Npas1P97459 Gm27867-201ENSMUST00000184778 125 ntBASIC12.18□□□□□ -0.46
Npas1P97459 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.18□□□□□ -0.46
Npas1P97459 Gm7506-201ENSMUST00000207758 815 ntBASIC12.18□□□□□ -0.46
Npas1P97459 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.18□□□□□ -0.46
Npas1P97459 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Npas1P97459 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npas1P97459 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.18□□□□□ -0.46
Npas1P97459 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Npas1P97459 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Npas1P97459 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.17□□□□□ -0.46
Npas1P97459 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Gm4459-201ENSMUST00000118750 468 ntBASIC12.17□□□□□ -0.46
Npas1P97459 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Npas1P97459 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.17□□□□□ -0.46
Npas1P97459 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.17□□□□□ -0.46
Npas1P97459 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npas1P97459 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Npas1P97459 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Grk6-205ENSMUST00000224653 2976 ntBASIC12.16□□□□□ -0.46
Npas1P97459 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Npas1P97459 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.16□□□□□ -0.46
Npas1P97459 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.16□□□□□ -0.46
Npas1P97459 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.16□□□□□ -0.46
Npas1P97459 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Npas1P97459 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.16□□□□□ -0.46
Npas1P97459 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.16□□□□□ -0.46
Npas1P97459 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npas1P97459 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms