Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm4986-201ENSMUST00000119731 549 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm25668-201ENSMUST00000157700 129 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.66□□□□□ -0.86
PrkdcP97313 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.66□□□□□ -0.86
PrkdcP97313 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.66□□□□□ -0.86
PrkdcP97313 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PrkdcP97313 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Gm5049-201ENSMUST00000195878 1590 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.65□□□□□ -0.86
PrkdcP97313 Gm11667-201ENSMUST00000119828 486 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Gm12882-201ENSMUST00000121696 517 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC9.65□□□□□ -0.86
PrkdcP97313 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
PrkdcP97313 Gm9083-201ENSMUST00000120423 819 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Gm12208-201ENSMUST00000122004 163 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
PrkdcP97313 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.65□□□□□ -0.86
PrkdcP97313 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PrkdcP97313 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
PrkdcP97313 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
PrkdcP97313 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.65□□□□□ -0.87
PrkdcP97313 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Gm2260-201ENSMUST00000184965 657 ntBASIC9.65□□□□□ -0.87
PrkdcP97313 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.65□□□□□ -0.87
PrkdcP97313 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.65□□□□□ -0.87
PrkdcP97313 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PrkdcP97313 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm21009-201ENSMUST00000197169 1669 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm24830-201ENSMUST00000102024 166 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Gm15371-201ENSMUST00000117057 784 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm25890-201ENSMUST00000177643 165 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Gm22614-201ENSMUST00000178300 165 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm22042-201ENSMUST00000082989 165 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Gm26232-201ENSMUST00000083360 166 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Gm24136-201ENSMUST00000083374 165 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Gm26110-201ENSMUST00000083971 165 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
PrkdcP97313 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PrkdcP97313 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm11628-201ENSMUST00000117568 171 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 AC174678.1-201ENSMUST00000228007 2749 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Gm13123-201ENSMUST00000122173 492 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Mir6927-201ENSMUST00000184494 71 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.64□□□□□ -0.87
PrkdcP97313 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PrkdcP97313 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PrkdcP97313 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC9.64□□□□□ -0.87
PrkdcP97313 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms