Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Six5P70178 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Six5P70178 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Six5P70178 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Six5P70178 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Six5P70178 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.56□□□□□ -0.24
Six5P70178 Gm25287-201ENSMUST00000103846 110 ntBASIC13.56□□□□□ -0.24
Six5P70178 Gm22918-201ENSMUST00000103855 110 ntBASIC13.56□□□□□ -0.24
Six5P70178 Gm18889-201ENSMUST00000174284 929 ntBASIC13.56□□□□□ -0.24
Six5P70178 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.56□□□□□ -0.24
Six5P70178 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.56□□□□□ -0.24
Six5P70178 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Six5P70178 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.56□□□□□ -0.24
Six5P70178 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Six5P70178 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.56□□□□□ -0.24
Six5P70178 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.56□□□□□ -0.24
Six5P70178 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Six5P70178 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Six5P70178 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Six5P70178 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Gm38225-201ENSMUST00000194001 393 ntBASIC13.55□□□□□ -0.24
Six5P70178 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.55□□□□□ -0.24
Six5P70178 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Six5P70178 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Six5P70178 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Six5P70178 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.54□□□□□ -0.24
Six5P70178 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.54□□□□□ -0.24
Six5P70178 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.54□□□□□ -0.24
Six5P70178 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Six5P70178 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.54□□□□□ -0.24
Six5P70178 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.54□□□□□ -0.24
Six5P70178 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.54□□□□□ -0.24
Six5P70178 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Gm37935-201ENSMUST00000192012 982 ntBASIC13.54□□□□□ -0.24
Six5P70178 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.54□□□□□ -0.24
Six5P70178 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Six5P70178 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.54□□□□□ -0.24
Six5P70178 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.54□□□□□ -0.24
Six5P70178 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Six5P70178 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Six5P70178 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.54□□□□□ -0.24
Six5P70178 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Six5P70178 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Six5P70178 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Six5P70178 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Six5P70178 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms