Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.22□□□□□ -0.13
Lhx1P63006 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lhx1P63006 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.22□□□□□ -0.13
Lhx1P63006 Gm27680-201ENSMUST00000184192 160 ntBASIC14.22□□□□□ -0.13
Lhx1P63006 Gm44344-201ENSMUST00000200287 129 ntBASIC14.22□□□□□ -0.13
Lhx1P63006 Gm16476-201ENSMUST00000221544 139 ntBASIC14.22□□□□□ -0.13
Lhx1P63006 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.22□□□□□ -0.13
Lhx1P63006 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx1P63006 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lhx1P63006 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.21□□□□□ -0.13
Lhx1P63006 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx1P63006 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lhx1P63006 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.21□□□□□ -0.13
Lhx1P63006 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.21□□□□□ -0.13
Lhx1P63006 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx1P63006 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx1P63006 Gm38294-201ENSMUST00000192831 381 ntBASIC14.21□□□□□ -0.13
Lhx1P63006 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.21□□□□□ -0.13
Lhx1P63006 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.21□□□□□ -0.13
Lhx1P63006 Dupd1-202ENSMUST00000224735 548 ntBASIC14.21□□□□□ -0.13
Lhx1P63006 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.21□□□□□ -0.13
Lhx1P63006 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lhx1P63006 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.21□□□□□ -0.13
Lhx1P63006 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.21□□□□□ -0.13
Lhx1P63006 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lhx1P63006 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Lhx1P63006 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lhx1P63006 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.2□□□□□ -0.14
Lhx1P63006 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
Lhx1P63006 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.2□□□□□ -0.14
Lhx1P63006 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lhx1P63006 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Gm14057-201ENSMUST00000120631 482 ntBASIC14.2□□□□□ -0.14
Lhx1P63006 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.2□□□□□ -0.14
Lhx1P63006 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Shd-206ENSMUST00000225145 998 ntBASIC14.2□□□□□ -0.14
Lhx1P63006 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lhx1P63006 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lhx1P63006 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms