Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.34□□□□□ -0.75
Rpl39P62892 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rpl39P62892 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.34□□□□□ -0.75
Rpl39P62892 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.34□□□□□ -0.75
Rpl39P62892 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rpl39P62892 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rpl39P62892 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Rpl39P62892 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.33□□□□□ -0.76
Rpl39P62892 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.33□□□□□ -0.76
Rpl39P62892 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Gm10231-201ENSMUST00000181584 441 ntBASIC10.33□□□□□ -0.76
Rpl39P62892 Gm27646-201ENSMUST00000183989 110 ntBASIC10.33□□□□□ -0.76
Rpl39P62892 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Gm10175-202ENSMUST00000208752 441 ntBASIC10.33□□□□□ -0.76
Rpl39P62892 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.33□□□□□ -0.76
Rpl39P62892 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.33□□□□□ -0.76
Rpl39P62892 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Rpl39P62892 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.33□□□□□ -0.76
Rpl39P62892 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rpl39P62892 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rpl39P62892 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.32□□□□□ -0.76
Rpl39P62892 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.32□□□□□ -0.76
Rpl39P62892 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.32□□□□□ -0.76
Rpl39P62892 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Rpl39P62892 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Rpl39P62892 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.32□□□□□ -0.76
Rpl39P62892 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Rpl39P62892 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rpl39P62892 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rpl39P62892 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rpl39P62892 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms