Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm5P62322 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lsm5P62322 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.07□□□□□ -0.48
Lsm5P62322 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.07□□□□□ -0.48
Lsm5P62322 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm5P62322 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.07□□□□□ -0.48
Lsm5P62322 Gm44454-201ENSMUST00000198541 138 ntBASIC12.07□□□□□ -0.48
Lsm5P62322 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm5P62322 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.07□□□□□ -0.48
Lsm5P62322 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lsm5P62322 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lsm5P62322 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm5P62322 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Lsm5P62322 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lsm5P62322 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm5P62322 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Rprl3-201ENSMUST00000157400 290 ntBASIC12.06□□□□□ -0.48
Lsm5P62322 Gm25745-201ENSMUST00000174945 133 ntBASIC12.06□□□□□ -0.48
Lsm5P62322 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lsm5P62322 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.06□□□□□ -0.48
Lsm5P62322 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm5P62322 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lsm5P62322 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm5P62322 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.05□□□□□ -0.48
Lsm5P62322 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm5P62322 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm5P62322 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.05□□□□□ -0.48
Lsm5P62322 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm5P62322 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm5P62322 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Lsm5P62322 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Lsm5P62322 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm5P62322 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms