Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.72□□□□□ -0.37
Lsm6P62313 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm6P62313 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Lsm6P62313 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm6P62313 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Gm11025-201ENSMUST00000140773 466 ntBASIC12.71□□□□□ -0.37
Lsm6P62313 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.71□□□□□ -0.37
Lsm6P62313 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.71□□□□□ -0.37
Lsm6P62313 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm6P62313 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lsm6P62313 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.71□□□□□ -0.37
Lsm6P62313 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Lsm6P62313 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm6P62313 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Lsm6P62313 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm6P62313 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm6P62313 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm6P62313 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm6P62313 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm6P62313 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm6P62313 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.7□□□□□ -0.38
Lsm6P62313 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Lsm6P62313 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.7□□□□□ -0.38
Lsm6P62313 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.7□□□□□ -0.38
Lsm6P62313 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 Gm20553-201ENSMUST00000204205 844 ntBASIC12.7□□□□□ -0.38
Lsm6P62313 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.7□□□□□ -0.38
Lsm6P62313 Gm45612-201ENSMUST00000211320 160 ntBASIC12.7□□□□□ -0.38
Lsm6P62313 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Gm10175-201ENSMUST00000086013 645 ntBASIC12.7□□□□□ -0.38
Lsm6P62313 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.7□□□□□ -0.38
Lsm6P62313 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm6P62313 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm6P62313 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.69□□□□□ -0.38
Lsm6P62313 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms