Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lsm3P62311 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lsm3P62311 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lsm3P62311 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Lsm3P62311 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.21□□□□□ -0.29
Lsm3P62311 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Gm8318-201ENSMUST00000182954 872 ntBASIC13.21□□□□□ -0.29
Lsm3P62311 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.21□□□□□ -0.29
Lsm3P62311 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.21□□□□□ -0.29
Lsm3P62311 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lsm3P62311 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm3P62311 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm3P62311 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Mir770-201ENSMUST00000103252 94 ntBASIC13.2□□□□□ -0.3
Lsm3P62311 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Gm11355-201ENSMUST00000121120 306 ntBASIC13.2□□□□□ -0.3
Lsm3P62311 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.2□□□□□ -0.3
Lsm3P62311 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.2□□□□□ -0.3
Lsm3P62311 Gm21559-201ENSMUST00000220638 855 ntBASIC13.2□□□□□ -0.3
Lsm3P62311 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.2□□□□□ -0.3
Lsm3P62311 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.2□□□□□ -0.3
Lsm3P62311 Gm8587-201ENSMUST00000076538 843 ntBASIC13.2□□□□□ -0.3
Lsm3P62311 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm3P62311 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Lsm3P62311 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lsm3P62311 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lsm3P62311 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Lsm3P62311 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.19□□□□□ -0.3
Lsm3P62311 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.19□□□□□ -0.3
Lsm3P62311 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.19□□□□□ -0.3
Lsm3P62311 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.19□□□□□ -0.3
Lsm3P62311 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.19□□□□□ -0.3
Lsm3P62311 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.19□□□□□ -0.3
Lsm3P62311 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.19□□□□□ -0.3
Lsm3P62311 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lsm3P62311 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm3P62311 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm3P62311 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Lsm3P62311 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Lsm3P62311 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm3P62311 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm3P62311 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lsm3P62311 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms