Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Matn2-206ENSMUST00000228570 2798 ntBASIC11.73□□□□□ -0.53
Sssca1P56873 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sssca1P56873 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sssca1P56873 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.72□□□□□ -0.53
Sssca1P56873 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.72□□□□□ -0.53
Sssca1P56873 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.72□□□□□ -0.53
Sssca1P56873 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.72□□□□□ -0.53
Sssca1P56873 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Gm7222-201ENSMUST00000117512 906 ntBASIC11.72□□□□□ -0.53
Sssca1P56873 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sssca1P56873 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.72□□□□□ -0.53
Sssca1P56873 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Sssca1P56873 Gm18669-201ENSMUST00000216049 778 ntBASIC11.72□□□□□ -0.53
Sssca1P56873 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sssca1P56873 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Sssca1P56873 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.72□□□□□ -0.53
Sssca1P56873 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sssca1P56873 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sssca1P56873 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sssca1P56873 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sssca1P56873 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sssca1P56873 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Sssca1P56873 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.71□□□□□ -0.53
Sssca1P56873 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sssca1P56873 Gm5682-201ENSMUST00000173402 505 ntBASIC11.71□□□□□ -0.53
Sssca1P56873 Gm9726-201ENSMUST00000180321 678 ntBASIC11.71□□□□□ -0.53
Sssca1P56873 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.71□□□□□ -0.53
Sssca1P56873 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.71□□□□□ -0.53
Sssca1P56873 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.71□□□□□ -0.53
Sssca1P56873 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sssca1P56873 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sssca1P56873 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.71□□□□□ -0.54
Sssca1P56873 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sssca1P56873 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.71□□□□□ -0.54
Sssca1P56873 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sssca1P56873 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sssca1P56873 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.71□□□□□ -0.54
Sssca1P56873 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sssca1P56873 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Sssca1P56873 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
Sssca1P56873 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sssca1P56873 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.7□□□□□ -0.54
Sssca1P56873 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sssca1P56873 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.7□□□□□ -0.54
Sssca1P56873 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44357-201ENSMUST00000195897 142 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm19658-201ENSMUST00000196231 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44367-201ENSMUST00000196836 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44350-201ENSMUST00000197197 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44390-201ENSMUST00000197533 144 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44313-201ENSMUST00000198018 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44486-201ENSMUST00000198508 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44314-201ENSMUST00000199263 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44394-201ENSMUST00000199558 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44484-201ENSMUST00000199873 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44466-201ENSMUST00000200264 138 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Gm44359-201ENSMUST00000200671 138 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms