Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Usp5P56399 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
Usp5P56399 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Usp5P56399 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Usp5P56399 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.86■□□□□ 0.29
Usp5P56399 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Gm13223-201ENSMUST00000118609 747 ntBASIC16.86■□□□□ 0.29
Usp5P56399 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Usp5P56399 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.86■□□□□ 0.29
Usp5P56399 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Usp5P56399 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Usp5P56399 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Usp5P56399 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.86■□□□□ 0.29
Usp5P56399 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.86■□□□□ 0.29
Usp5P56399 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp5P56399 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.86■□□□□ 0.29
Usp5P56399 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Usp5P56399 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Usp5P56399 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Mir7023-201ENSMUST00000185093 64 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm29310-201ENSMUST00000185468 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21825-201ENSMUST00000185728 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm29109-201ENSMUST00000185895 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21896-201ENSMUST00000186520 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21873-201ENSMUST00000186728 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21794-201ENSMUST00000187056 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21880-201ENSMUST00000187275 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21826-201ENSMUST00000187451 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21198-201ENSMUST00000188393 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21749-201ENSMUST00000189343 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21901-201ENSMUST00000189568 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm29424-201ENSMUST00000189716 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm28599-201ENSMUST00000189838 694 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21867-201ENSMUST00000189917 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm29269-201ENSMUST00000190087 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21722-201ENSMUST00000190153 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm28423-201ENSMUST00000190701 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21899-201ENSMUST00000190745 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21910-201ENSMUST00000191163 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21849-201ENSMUST00000191571 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm28678-201ENSMUST00000191593 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm20910-201ENSMUST00000193268 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm21871-201ENSMUST00000194621 696 ntBASIC16.85■□□□□ 0.29
Usp5P56399 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Gm6888-201ENSMUST00000221983 706 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.85■□□□□ 0.29
Usp5P56399 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp5P56399 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp5P56399 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp5P56399 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Usp5P56399 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp5P56399 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp5P56399 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp5P56399 Gm5566-201ENSMUST00000116118 459 ntBASIC16.84■□□□□ 0.29
Usp5P56399 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Gm9719-201ENSMUST00000162765 543 ntBASIC16.84■□□□□ 0.29
Usp5P56399 Gm25144-201ENSMUST00000179561 110 ntBASIC16.84■□□□□ 0.29
Usp5P56399 Gm25352-201ENSMUST00000179815 110 ntBASIC16.84■□□□□ 0.29
Usp5P56399 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Usp5P56399 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp5P56399 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms