Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdh11P55288 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Cdh11P55288 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdh11P55288 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.23□□□□□ -0.29
Cdh11P55288 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdh11P55288 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh11P55288 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdh11P55288 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdh11P55288 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdh11P55288 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh11P55288 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdh11P55288 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdh11P55288 Gm27300-201ENSMUST00000184085 97 ntBASIC13.22□□□□□ -0.29
Cdh11P55288 Gm27335-201ENSMUST00000184758 97 ntBASIC13.22□□□□□ -0.29
Cdh11P55288 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.22□□□□□ -0.29
Cdh11P55288 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh11P55288 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.22□□□□□ -0.29
Cdh11P55288 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.22□□□□□ -0.29
Cdh11P55288 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdh11P55288 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdh11P55288 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.22□□□□□ -0.29
Cdh11P55288 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdh11P55288 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh11P55288 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdh11P55288 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Cdh11P55288 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Gm4995-201ENSMUST00000117247 432 ntBASIC13.21□□□□□ -0.29
Cdh11P55288 Gm17271-201ENSMUST00000165535 355 ntBASIC13.21□□□□□ -0.29
Cdh11P55288 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Cdh11P55288 Gm8318-201ENSMUST00000182954 872 ntBASIC13.21□□□□□ -0.29
Cdh11P55288 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Gm43575-201ENSMUST00000196420 516 ntBASIC13.21□□□□□ -0.29
Cdh11P55288 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdh11P55288 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.21□□□□□ -0.29
Cdh11P55288 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh11P55288 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms