Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Shmt1P50431 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Shmt1P50431 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shmt1P50431 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Gm10275-202ENSMUST00000168697 495 ntBASIC15.3■□□□□ 0.04
Shmt1P50431 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Gm27533-201ENSMUST00000183800 152 ntBASIC15.3■□□□□ 0.04
Shmt1P50431 Gm27631-201ENSMUST00000184163 466 ntBASIC15.3■□□□□ 0.04
Shmt1P50431 Gm17837-201ENSMUST00000186435 985 ntBASIC15.3■□□□□ 0.04
Shmt1P50431 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.3■□□□□ 0.04
Shmt1P50431 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Gm6888-201ENSMUST00000221983 706 ntBASIC15.3■□□□□ 0.04
Shmt1P50431 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Shmt1P50431 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.3■□□□□ 0.04
Shmt1P50431 Gm10275-201ENSMUST00000092620 635 ntBASIC15.3■□□□□ 0.04
Shmt1P50431 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Shmt1P50431 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shmt1P50431 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shmt1P50431 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.3■□□□□ 0.04
Shmt1P50431 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Shmt1P50431 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Shmt1P50431 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shmt1P50431 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Gm6222-201ENSMUST00000120787 396 ntBASIC15.29■□□□□ 0.04
Shmt1P50431 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.29■□□□□ 0.04
Shmt1P50431 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.29■□□□□ 0.04
Shmt1P50431 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.29■□□□□ 0.04
Shmt1P50431 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Shmt1P50431 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shmt1P50431 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Shmt1P50431 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shmt1P50431 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shmt1P50431 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.29■□□□□ 0.04
Shmt1P50431 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shmt1P50431 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.29■□□□□ 0.04
Shmt1P50431 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.28■□□□□ 0.04
Shmt1P50431 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.28■□□□□ 0.04
Shmt1P50431 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.28■□□□□ 0.04
Shmt1P50431 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.28■□□□□ 0.04
Shmt1P50431 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shmt1P50431 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shmt1P50431 Gm12428-201ENSMUST00000119844 727 ntBASIC15.28■□□□□ 0.04
Shmt1P50431 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.28■□□□□ 0.04
Shmt1P50431 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.28■□□□□ 0.04
Shmt1P50431 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shmt1P50431 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.28■□□□□ 0.04
Shmt1P50431 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.28■□□□□ 0.04
Shmt1P50431 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shmt1P50431 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms