Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prox1P48437 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Prox1P48437 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.93□□□□□ -0.18
Prox1P48437 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Prox1P48437 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.93□□□□□ -0.18
Prox1P48437 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.93□□□□□ -0.18
Prox1P48437 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.93□□□□□ -0.18
Prox1P48437 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.93□□□□□ -0.18
Prox1P48437 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.93□□□□□ -0.18
Prox1P48437 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.93□□□□□ -0.18
Prox1P48437 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Prox1P48437 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.93□□□□□ -0.18
Prox1P48437 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.93□□□□□ -0.18
Prox1P48437 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prox1P48437 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.92□□□□□ -0.18
Prox1P48437 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prox1P48437 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Prox1P48437 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Prox1P48437 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.92□□□□□ -0.18
Prox1P48437 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Birc2-201ENSMUST00000054878 378 ntBASIC13.92□□□□□ -0.18
Prox1P48437 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.92□□□□□ -0.18
Prox1P48437 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.92□□□□□ -0.18
Prox1P48437 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prox1P48437 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Prox1P48437 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Prox1P48437 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Prox1P48437 Gm28659-201ENSMUST00000188013 759 ntBASIC13.91□□□□□ -0.18
Prox1P48437 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.91□□□□□ -0.18
Prox1P48437 Gm43767-201ENSMUST00000198933 381 ntBASIC13.91□□□□□ -0.18
Prox1P48437 Gm44771-201ENSMUST00000206975 626 ntBASIC13.91□□□□□ -0.18
Prox1P48437 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.91□□□□□ -0.18
Prox1P48437 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.91□□□□□ -0.18
Prox1P48437 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.91□□□□□ -0.18
Prox1P48437 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.91□□□□□ -0.18
Prox1P48437 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Prox1P48437 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prox1P48437 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prox1P48437 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prox1P48437 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.9□□□□□ -0.18
Prox1P48437 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prox1P48437 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prox1P48437 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Prox1P48437 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Prox1P48437 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prox1P48437 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prox1P48437 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.9□□□□□ -0.18
Prox1P48437 Gm4535-201ENSMUST00000182274 558 ntBASIC13.9□□□□□ -0.18
Prox1P48437 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prox1P48437 Gm10355-201ENSMUST00000097146 517 ntBASIC13.9□□□□□ -0.18
Prox1P48437 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prox1P48437 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms